Protein ZmbHLH53
ZmbHLH53 is a protein in the bHLH family.
Information
TF Name: ZmbHLH53
Species: Maize
TF Family: bHLH
Gene Name(Synonym): BHLH53
Uniprot ID: B4FD44
Subgenome: 1

Protein ZmbHLH53

ZmbHLH53 is a protein in the bHLH family.

Overview of domains present in v5 transcripts
PF00010
Zm00001eb251200_T003
Zm00001eb251200_T001
Zm00001eb251200_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d017677DAPseq no logo sequence fimo position
Zm00001d017677DAPseq no logo sequence fimo position
Zm00001d017677ChIPseq no logo sequence fimo position
Zm00001d017677PChIPseq no logo sequence fimo position

Interactions where ZmbHLH53 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmbHLH53 is the target  
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There are 135 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb251200_T003 from maize genome v5

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFF
VVDGVGQGFCIEHKPMHKHKFPPYKLQGSCTTNQAILF

MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFF
VVDGVGQGFCIEHKPMHKHKFPPYKLQGSCTTNQAILF

MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFF
VVDGVGQGFCIEHKPMHKHKFPPYKLQGSCTTNQAILF

MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFF
VVDGVGQGFCIEHKPMHKHKFPPYKLQGSCTTNQAILF

MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFF
VVDGVGQGFCIEHKPMHKHKFPPYKLQGSCTTNQAILF

MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFF
VVDGVGQGFCIEHKPMHKHKFPPYKLQGSCTTNQAILF

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00010
PF00010
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Nucleotide Sequence
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GTCACTGTTGGCGCTGCCGATTTGC...

GRMZM2G111146_T01 from maize genome v3


Related TFome: pUT3432

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVEEGCGLATADDIAAAVH
HVLCIIDAEATEQQLLAAAGPQPQ

Nucleotide Sequence
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GTCACTGTTGGCGCTGCCGATTTGC...

GRMZM2G111146_T02 from maize genome v3

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVEEGCGLATAD
DIAAAVHHVLCIIDAEATEQQLLAAAGPQPQ

Nucleotide Sequence
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CGAACCCCGCACGCAGACGCAGGCG...

GRMZM2G111146_T03 from maize genome v3

Amino Acid Sequence
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MRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRRSGVADVEV
TLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFFVVDGVGQG
FCIEHKPMHKHKFPPYKLQGSCTTNQAILF

Nucleotide Sequence
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GTAGTAGTAGTAATAACTCCTGCTG...

GRMZM2G111146_T04 from maize genome v3

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFF
VVDGVGQGFCIEHKPMHKHKFPPYKLQGSCTTNQAILF

Nucleotide Sequence
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GGCGAACCCCGCACGCAGACGCAGG...

Zm00001d017677_T001 from maize genome v4

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVSFDSFLRFFF
VVDGVEEGCGLATADDIAAAVHHVLCIIDAEATEQQLLAAAGPQPQ

Nucleotide Sequence
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GAAGCCACGGCTAGTAGCTCCTCCA...

Zm00001d017677_T002 from maize genome v4

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVEEGCGLATADDIAAAVH
HVLCIIDAEATEQQLLAAAGPQPQ

Nucleotide Sequence
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GAAGCCACGGCTAGTAGCTCCTCCA...

Zm00001d017677_T003 from maize genome v4

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVEEGCGLATAD
DIAAAVHHVLCIIDAEATEQQLLAAAGPQPQ

Nucleotide Sequence
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AGCGCGCTAATAGGCGAACCCCGCA...

Zm00001eb251200_T001 from maize genome v5

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVEEGCGLATADDIAAAVH
HVLCIIDAEATEQQLLAAAGPQPQ

Nucleotide Sequence
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GATGCCCATGAGTCACTGTTGGCGC...

Zm00001eb251200_T002 from maize genome v5

Amino Acid Sequence
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MSALVDALCAPPSDTALVYDTFNAANFLFDAAAFCDGAGIVAAPASAHQAPVEAQAATTSAAPTTTARARKRRRRPRSCK
SREETETQRMTHIAVERNRRRQMNEYLAALRSIMPEAYVQRGDQASIVGGAIEFVKELEQQVQCLEAQKRKLLVHQRVAA
AKPADATPMRASSSGARACCADSAAAAATTSNCSSGLTTEDAAADHALPPPPFAQFFTYPQYVWCHSAARDPAEEEDGRR
SGVADVEVTLVETHASVRVMTARRPGQLLSLVTGLQALRLAVLHLSVVTALDALVLYTTSVKVHNCTKKVEEGCGLATAD
DIAAAVHHVLCIIDAEATEQQLLAAAGPQPQ

Nucleotide Sequence
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GTCACTGTTGGCGCTGCCGATTTGC...


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